PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Psi001815
Organism
Picea sitchensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family BES1
Protein Properties Length: 407aa    MW: 42700.3 Da    PI: 8.2257
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Psi#S50071244PU_unrefUnigeneView CDS
PUT-183a-Picea_sitchensis-13005PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822199.41.2e-6121442141
     DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkss 101
                ++ r ptwkErEnnkrRERrRRaiaakiy+GLR++Gnyklpk++DnneVlkALc+eAGw ve+DGttyrkg+ p+e++e++g+sas+sp+ss++      
  Psi001815   2 TGSRLPTWKERENNKRRERRRRAIAAKIYSGLRMYGNYKLPKHCDNNEVLKALCNEAGWQVEEDGTTYRKGCPPPERMETGGASASMSPSSSYH------ 95 
                57899*************************************************************************************9998...... PP

     DUF822 102 alaspvesysaspksssfpspssldsislasa...........asllpvls 141
                  +sp++sy+asp+sssfpsp  + ++s as+             l+p+l+
  Psi001815  96 --PSPAASYHASPASSSFPSPGPSYQASPASSsfpspgpsyqdGYLIPWLK 144
                ..6666666666666666666544333333322444444444455555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.6E-603146IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MTGSRLPTWK ERENNKRRER RRRAIAAKIY SGLRMYGNYK LPKHCDNNEV LKALCNEAGW  60
QVEEDGTTYR KGCPPPERME TGGASASMSP SSSYHPSPAA SYHASPASSS FPSPGPSYQA  120
SPASSSFPSP GPSYQDGYLI PWLKNLGVGG GGVGTGGSGR GLPPIGTSNS APVTPPLSSP  180
TARGPRAMPD WDALVKISAA AANENSSHCN GTGGAAVVTD DPAAAFCNAV SGWSSQQHHH  240
HYPFLSAPPS PAPHSHSRRE PLDLSNATVD NTKGRWLGGV RVSASASASM GPSSPTFSLL  300
SPAAQLEHSL GGERSHFFVP ADSRLWTPVG SAMSSPCRTP ATGGAVVRVA AADEFQFECG  360
SVKPWQGERI HEECGGDMDI ASDDLELTLG SSKRRAKADS AATPMFS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-22575372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-22575372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-22575372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-22575372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009352718.18e-83PREDICTED: BES1/BZR1 homolog protein 4-like
TrEMBLB8LS330.0B8LS33_PICSI; Uncharacterized protein
STRINGXP_009352718.13e-82(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.13e-30BES1/BZR1 homolog 4