PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Psi002158
Organism
Picea sitchensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family BES1
Protein Properties Length: 367aa    MW: 38960.4 Da    PI: 8.1258
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Psi#S41651866PU_unrefUnigeneView CDS
PUT-183a-Picea_sitchensis-18725PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822201.52.6e-6231432149
     DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkss 101
                ++ r ptwkErEnnk+RERrRRaiaakiyaGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+e+ e+agss s+sp ss++      
  Psi002158   3 SGSRLPTWKERENNKKRERRRRAIAAKIYAGLRMYGNYKLPKHCDNNEVLKALCAEAGWMVEEDGTTYRKGCKPTERIEVAGSS-SVSPASSYH------ 95 
                789************************************************************************888888765.789999999...... PP

     DUF822 102 alaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsss 149
                  +sp++sy++sp+sssf sp+s+++ ++     +sl+p+l++ls++ss+
  Psi002158  96 --PSPAPSYQPSPASSSFASPASSSFEPAGTGaaNSLIPWLKNLSSSSSA 143
                ..9***************99999888776654669*********987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.0E-614138IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MTSGSRLPTW KERENNKKRE RRRRAIAAKI YAGLRMYGNY KLPKHCDNNE VLKALCAEAG  60
WMVEEDGTTY RKGCKPTERI EVAGSSSVSP ASSYHPSPAP SYQPSPASSS FASPASSSFE  120
PAGTGAANSL IPWLKNLSSS SSASSSGRLI HGGGSISAPV TPPLSSPTGR GARAKLDWDA  180
MVKAVANESN DCPNSGFSTP VSPWSNYPFV ASSTPASPGR HAEMATQLSN AVVDKGRWMG  240
GIRMMAFPSA GPSSPTFNLL TPAAQLQHGL ATEGGRLWTP GQSGVSSPCN NRAGEEERLL  300
PPFQEGMDAS DEFAFGSVAV KPWQGERIHE ECGGEIGSDD LELTLGSFSS SSSKLRSDRE  360
PLFSVKE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-25687372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-25687372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-25687372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-25687372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Psi.7830.0needle| shoot
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009352718.11e-102PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV887e-83BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA9NMS90.0A9NMS9_PICSI; Uncharacterized protein
STRINGXP_009352718.11e-101(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.12e-58BES1/BZR1 homolog 4