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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Psi004611 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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| Family |
NAC |
| Protein Properties |
Length: 205aa MW: 23337.9 Da PI: 8.3818 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| gnl|UG|Psi#S42990439 | PU_unref | Unigene | View CDS |
| PUT-183a-Picea_sitchensis-14195 | PU_ref | plantGDB | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 37 | 1e-11 | 2 | 28 | 102 | 128 |
NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
+kk Lvfykg+apkg+kt+W+mheyr+
Psi004611 2 VKKALVFYKGKAPKGSKTNWIMHEYRM 28
79***********************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 205 aa
Download sequence Send
to blast |
XVKKALVFYK GKAPKGSKTN WIMHEYRMAE INMATRKKNT LRLDDWVLCR IYNKKSSAEK 60
LEEKKLAEEM ESRRDNEETV EQQKNSQSVQ LEPSRTDAST VSAEGGLPST NSSILISQLP 120
AAMNLSPAHQ NPFYQPQSTD GAQINMKLAN QLIQKQQQQS GQSLNFNLGL DGMQSPYFQL 180
DHSEPSSLFS PYQEYIDSYS IQRSY
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 8e-22 | 2 | 60 | 116 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 8e-22 | 2 | 60 | 116 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 8e-22 | 2 | 60 | 116 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 8e-22 | 2 | 60 | 116 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 8e-22 | 2 | 60 | 119 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 8e-22 | 2 | 60 | 119 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 8e-22 | 2 | 60 | 119 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 8e-22 | 2 | 60 | 119 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 8e-22 | 2 | 60 | 119 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 8e-22 | 2 | 60 | 119 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 8e-22 | 2 | 60 | 119 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 8e-22 | 2 | 60 | 119 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 8e-22 | 2 | 60 | 116 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 8e-22 | 2 | 60 | 116 | 171 | NAC domain-containing protein 19 |
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