PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Psi009297
Organism
Picea sitchensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 184aa    MW: 20585 Da    PI: 4.4222
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Psi#S55420235PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.68.4e-106411755
        AP2 17 AeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               AeIr p++   r +++lg++ tae+Aa+a++aa  +l+g
  Psi009297  6 AEIRMPKT---REKIWLGSYKTAEQAARAYDAAVYCLRG 41
               89999865...49************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.751149IPR001471AP2/ERF domain
CDDcd000185.60E-19251No hitNo description
SMARTSM003804.1E-14255IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-19451IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-12651IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MGELGAEIRM PKTREKIWLG SYKTAEQAAR AYDAAVYCLR GPNAKFNFPD SVYSIPSVSS  60
LTRQQIQVAA AKYALGEIPS TSPSVQNIKN NNQKAREKPA SQSQPSLVSE TAWPCDSQQI  120
SKAQDLGFWE TPFYGNCGLN LEKIPSIEEA SVWEFIPTSQ EEQQEGCIFS DPTDLWNFET  180
FELF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5ADJ91e-128D5ADJ9_PICSI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.13e-28ERF family protein