PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Psi010211

Organism

Picea sitchensis

Taxonomic ID

3332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

VOZ

Protein Properties

Length: 141aa MW: 16388.6 Da PI: 9.1503

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Psi#S53187423	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	269.8	3.5e-83	1	135	66	200
VOZ 66 lsakvqgkevgipecegaatakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssf 165 l ak+ gk vgipecegaatakspwna+elfdl +l+ge +rewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmk++gg krsyymdpqpss+f Psi010211 1 LGAKTMGKAVGIPECEGAATAKSPWNAPELFDLFFLQGEVVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKDLGGVKRSYYMDPQPSSQF 100 579*********************************************************************************************** PP VOZ 166 ewhlyeyeineldalalyrlelklvdekksakgkv 200 ewhl+eye+n++da+ lyrlelk+vd+kk++kg+ Psi010211 101 EWHLFEYEMNNCDACVLYRLELKQVDSKKNTKGRW 135 ******************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence Send to blast
LGAKTMGKAV GIPECEGAAT AKSPWNAPEL FDLFFLQGEV VREWLFFDKP RRAFESGNRK 60 QRSLPDYSGR GWHESRKQVM KDLGGVKRSY YMDPQPSSQF EWHLFEYEMN NCDACVLYRL 120 ELKQVDSKKN TKGRWATTLD R

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011626288.1	3e-78	transcription factor VOZ1
Refseq	XP_011626289.1	3e-78	transcription factor VOZ1
Refseq	XP_018855072.1	6e-79	PREDICTED: transcription factor VOZ1-like
Refseq	XP_018860320.1	2e-78	PREDICTED: transcription factor VOZ1-like isoform X2
Swissprot	Q9SGQ0	2e-74	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A199VTN3	4e-79	A0A199VTN3_ANACO; Transcription factor VOZ1
TrEMBL	A0A2G5CV06	1e-77	A0A2G5CV06_AQUCA; Uncharacterized protein
STRING	Aquca_036_00034.1	2e-78	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	7e-77	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]