PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Psi012339
Organism
Picea sitchensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family BES1
Protein Properties Length: 320aa    MW: 34562.9 Da    PI: 5.2411
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Psi#S55420620PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822146.32.7e-4519113398
     DUF822   3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssas.aspesslqssl 98 
                +   pt kErEnnk+RER+RRa+aaki+aGLR +Gnyklpk++DnneVlkALc+eAGw+v++DGttyr  +  +e+a+ +g sa  + + +++  s 
  Psi012339  19 GSALPTSKERENNKKRERKRRALAAKIFAGLRLYGNYKLPKHCDNNEVLKALCAEAGWIVHPDGTTYRPDTGIPERAD-MGISAPpTAVAAPYP-SE 113
                56679***************************************************************8888775555.444444144444444.44 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.0E-4121112IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
GDPSSLELEF CVVVDMTAGS ALPTSKEREN NKKRERKRRA LAAKIFAGLR LYGNYKLPKH  60
CDNNEVLKAL CAEAGWIVHP DGTTYRPDTG IPERADMGIS APPTAVAAPY PSENSSLIPW  120
LKGLGSINRL GTQRTLLPLQ IDRGNCSAPV TPPLTSPTGC SPYGKLPGFC SFQATSAMGY  180
FNCESGFAVQ GADACTNAAN VEYNTNLMIS ENAAISPTSI QGSENGWTFS FGPLDQNNEG  240
TSTTAWKPAG TPYFRAESKA TELFEGIESE QRMVSSAIKA RKNEKMQNLK PDDLDLELTL  300
GYSCAQNHPE EPSIRLECGL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A6e-174086391437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B6e-174086391437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C6e-174086391437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D6e-174086391437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5ACJ30.0D5ACJ3_PICSI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.12e-28BES1/BZR1 homolog 4