PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta000411
Organism
Pinus taeda
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family BES1
Protein Properties Length: 414aa    MW: 43679.4 Da    PI: 8.0307
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pta#S24128564PU_unrefUnigeneView CDS
PUT-157a-Pinus_taeda-31482554PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822198.91.7e-6121432140
     DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkss 101
                ++ r ptwkErEnnkrRERrRRaiaakiy+GLR++Gnyklpk++DnneVlkALc+eAGw ve+DGttyrkg+ p+e++e++g+sas+sp+ss++      
  Pta000411   2 TGSRLPTWKERENNKRRERRRRAIAAKIYSGLRMYGNYKLPKHCDNNEVLKALCNEAGWQVEEDGTTYRKGCPPPERMETGGASASMSPSSSYH------ 95 
                57899************************************************************************************99998...... PP

     DUF822 102 alaspvesysaspksssfpspssldsislasa...........asllpvl 140
                  +sp++sy+asp+sssfpsp  + ++s as+             l+p+l
  Pta000411  96 --PSPAASYHASPASSSFPSPGPSYQASPASSsfpspgpsyqdGYLIPWL 143
                ..666666666666666666654433333332244444444444555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056877.8E-613146IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MTGSRLPTWK ERENNKRRER RRRAIAAKIY SGLRMYGNYK LPKHCDNNEV LKALCNEAGW  60
QVEEDGTTYR KGCPPPERME TGGASASMSP SSSYHPSPAA SYHASPASSS FPSPGPSYQA  120
SPASSSFPSP GPSYQDGYLI PWLKNLAGGG GVGTAGSGRG LPPMGTSNSA PVTPPLSSPT  180
ARGPRAMPDW ETLVKLSAAA TNDNSNHCNG TGGATVVADD PAAAFCNAVS GWSSQQQQHH  240
HYPFLSAPPS PAPHSHSRRE PLDLSNATVD NTKGRWLGGV RVSASASASM GPSSPTFSLL  300
SPAAQLEHSL GGERSLLEGE RSHFFVPADS RLWTPVGSAM SSPCRTPATG GAVVRVAAAD  360
EFQFECGSVK PWQGERIHEE CGGDMDIASD DLELTLGNSK RRAKAESAAT PMFS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-22575372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-22575372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-22575372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-22575372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pta.56660.0embryo| root| shoot| xylem
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A3G6JA110.0A0A3G6JA11_PINTA; BES1/BZR1 homolog protein 4
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.14e-32BES1/BZR1 homolog 4