PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta000621
Organism
Pinus taeda
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family BES1
Protein Properties Length: 281aa    MW: 30523.4 Da    PI: 7.6232
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pta#S20502848PU_unrefUnigeneView CDS
PUT-157a-Pinus_taeda-33621PU_refplantGDBView CDS
PUT-157a-Pinus_taeda-33622PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822125.75.8e-3923111795
     DUF822   7 ptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                 ++ E+E++k+RER+RR i++ki+ GLR++G+y+lp raD+n+Vl+AL++eAGw+ve+DGttyr++  p+++ ++     ++++  +++
  Pta000621  23 SSASEKEKTKLRERHRRSITTKIFNGLRKYGGYNLPPRADINDVLRALANEAGWIVEPDGTTYRAQGIPQTSGNHSMPPMQQTTVMKTS 111
                5678************************************************************7766663444433333333333333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.6E-3624184IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MKESSSHDAH SREGEQKQLK PKSSASEKEK TKLRERHRRS ITTKIFNGLR KYGGYNLPPR  60
ADINDVLRAL ANEAGWIVEP DGTTYRAQGI PQTSGNHSMP PMQQTTVMKT SLTPTSSFGG  120
GVSMGGFNCP IPAIITDNID MTGGDCSTTA SPRHMGIQQP SNNSSLSLLP SSGLSSPFAS  180
PASSDGAQGQ LVTSFFPGMA GGYLPTSGRE REMSLMKDDV SAYFSADTLE AREFMTSRDT  240
LEAREFMTSR DTLESRELLM GRNNIIPNSN ILNYANLSXX X
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A5e-114086391437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B5e-114086391437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C5e-114086391437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D5e-114086391437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pta.16740.0needle| shoot| xylem
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024391347.17e-65protein BZR1 homolog 4-like isoform X2
TrEMBLA0A2K1KMG84e-61A0A2K1KMG8_PHYPA; Uncharacterized protein
STRINGPP1S70_273V6.11e-62(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.14e-23beta-amylase 7