PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta001530
Organism
Pinus taeda
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family bZIP
Protein Properties Length: 429aa    MW: 46903 Da    PI: 6.248
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pta#S25672925PU_unrefUnigeneView CDS
PUT-157a-Pinus_taeda-50126PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.21.5e-07364406749
                HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                e ++ +N++AArrsR+RK++ +  Le+ +++  ae++a k+++
  Pta001530 364 EAKRRQNTLAARRSRKRKLEHQRDLETTIENERAERDAWKQRA 406
                67999*************************9999998877665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd121931.16E-18362414No hitNo description
Gene3DG3DSA:1.20.5.1702.4E-5363406No hitNo description
SuperFamilySSF579593.0E-8363412No hitNo description
PROSITE patternPS000360366380IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
XGNLQPFFPH SPTNQSPPSH RHHVRLSDLS SSRLSQLLDQ HELNTLISIN HVSVTPFTSL  60
PSGSASGTNP NYGSPPHQST QPIPSSSNQY LSTHQPTDLG NLSISQQIEF DAICSDYLTM  120
LSSPTHMDPK NKADTVSPAL RAASPPPEHE AAAKAILEVL EASPSYKVEH EMNAYLTSPL  180
IDSPWEDEFL TTPALLPGGD MGIDIMASPA LLDDDEVYTS APLFGDEPLF EPFTFEKLNA  240
DRRGPALDSL SLGLPSEPLD SPTSSTSPVS AAGSRGKRSA GKQVTKTSRR KSVPTGTRKN  300
VTPESLIPVD APIQDRKYAS ESATSRKELP AVFARKRKRA SSELDNEDDI LAAPPSTNEL  360
SAIEAKRRQN TLAARRSRKR KLEHQRDLET TIENERAERD AWKQRALAFE AILNSNGIRI  420
PPEFAIQRV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1333339ARKRKRA
2365379KRRQNTLAARRSRKR
3365380KRRQNTLAARRSRKRK
4366381RRQNTLAARRSRKRKL
5374380RRSRKRK
6374381RRSRKRKL
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pta.163670.0root
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2H3JC559e-67A0A2H3JC55_WOLCO; Uncharacterized protein
STRINGS8EQU36e-64(Fomitopsis pinicola)