PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta001890
Organism
Pinus taeda
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family EIL
Protein Properties Length: 381aa    MW: 42320.5 Da    PI: 4.6883
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pta#S24911300PU_unrefUnigeneView CDS
PUT-157a-Pinus_taeda-60676PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN383.55.3e-262174223353
                HHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX...XXXXXXXXXXXXXXXXXXXX.XXXXXX.XXXXXXXXXX.............. CS
       EIN3 223 eirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss...slrkqspkvtlsceqkedve.gkkeskikhvqavktta.............. 302
                +ir+l+rqsk+lqdkm+akes+++l+v+nqee+++++  ++  ++   s+++++ ++t+s+++++dve  +++++ +   +++ ++              
  Pta001890   2 QIRKLVRQSKCLQDKMTAKESATWLAVVNQEEALARQKNPNacPPtnaSVTTHAGSLTFSSGSEYDVEgFEDDPN-SIYTNNDVQDckpqdldllnsevq 100
                79***********************************999986335678889****************7333333.322222222245666********* PP

                ..........................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
       EIN3 303 ..........................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                                          +++++rkrk    +++  ++++ ++tc ++q++++e +l+f+d++ ++ ++
  Pta001890 101 eckpqdfdhfnvgisnegvsalqvgdNVDFIRKRK--LPQESPLEDQK-VYTCPHEQCPYHERQLGFSDQSLRNAHQ 174
                **********************************9..44455556665.5************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.3180.102.8E-13242IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048731.2E-7233No hitNo description
SuperFamilySSF1167684.97E-9237IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
XQIRKLVRQS KCLQDKMTAK ESATWLAVVN QEEALARQKN PNACPPTNAS VTTHAGSLTF  60
SSGSEYDVEG FEDDPNSIYT NNDVQDCKPQ DLDLLNSEVQ ECKPQDFDHF NVGISNEGVS  120
ALQVGDNVDF IRKRKLPQES PLEDQKVYTC PHEQCPYHER QLGFSDQSLR NAHQSTCAYR  180
TDLQGMGYQR PEPQESKSLF CISTGQPNQL QVQGKVSIFP SEKEGQTTSN GNVNLNPLGT  240
TSSAIPTGNQ QPISELLALY DGLHQNKTAT LGNLKMMNGH NQLEVNMHPA SQGGEVFKIT  300
PDDNFFGQGV IAGNNGNDFG SNMQLVMREG LSLDQSRVYD QPFIHHCQEM NGDMKFVSAY  360
NNIPIDYAVP ETVSKYDNSI W
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A8e-1524393134Protein ETHYLENE INSENSITIVE 3
4zds_B8e-1524393134Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pta.95330.0root| shoot| xylem
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB8LNH40.0B8LNH4_PICSI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.19e-36ETHYLENE-INSENSITIVE3-like 1