PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta003414
Organism
Pinus taeda
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family bZIP
Protein Properties Length: 281aa    MW: 31284.8 Da    PI: 4.5069
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pta#S25536551PU_unrefUnigeneView CDS
PUT-157a-Pinus_taeda-3046PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.43.5e-09218266654
                HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                ++ ++ +N++AArrsR+RK++ + eLe+  +  ++  ++ ++++ +l+ 
  Pta003414 218 VAAKRLQNTLAARRSRRRKLEHQLELETNLDREKQLKEQWRSRAMTLEA 266
                6789************************999999988888988888875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579596.25E-8216268No hitNo description
CDDcd121932.94E-19216268No hitNo description
PROSITE patternPS000360221235IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MTPSAEDESF SSLCSEYLTM LDSTPNTASV EEATQAILNI FRADPQTKPS EDFLTSPMEE  60
SPFDDFLSTP ALGGDFQDFT SPLIFESDDV GAPYHHTPLF DDVGLFEPPS SSDKRTAPHL  120
SSAVDLDRMY TVSPGTPALD ASPFFPPSHR LPFNLPTGTR KNLTPETLIP LDAPVQSRNY  180
LTPSVTSRKE SSRKRSRTEA SFDDDDEADK EVGELDAVAA KRLQNTLAAR RSRRRKLEHQ  240
LELETNLDRE KQLKEQWRSR AMTLEALLMS HGIPVPPAVP Y
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pta.129270.0root| xylem
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1X6MK474e-63A0A1X6MK47_9APHY; Uncharacterized protein
TrEMBLK5VKY76e-62K5VKY7_PHACS; Uncharacterized protein
STRINGS8EQU36e-57(Fomitopsis pinicola)