PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta003486
Organism
Pinus taeda
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family BES1
Protein Properties Length: 278aa    MW: 30172 Da    PI: 7.6782
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pta#S25561429PU_unrefUnigeneView CDS
PUT-157a-Pinus_taeda-56398PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822152.53.2e-47482380
     DUF822  3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr.kgskpleeae 80
               + r p+wkErEnnk+RERrRRaiaaki++GLR +Gnyklpk++DnneVlkALc+eAGwvve+DG  yr +g+kp e  +
  Pta003486  4 ANRLPNWKERENNKKRERRRRAIAAKIFTGLRLYGNYKLPKHCDNNEVLKALCAEAGWVVEEDGSAYRkQGMKPSECVN 82
               5799****************************************************************55677763333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.0E-43584IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MSPANRLPNW KERENNKKRE RRRRAIAAKI FTGLRLYGNY KLPKHCDNNE VLKALCAEAG  60
WVVEEDGSAY RKQGMKPSEC VNGVSSPVEG NNPCGLSVGG GAENGSLIPW LKDLGSGGLP  120
NNGLQRLCSS APVTPPLSSP TTIRCSIPYN IKSEWDKDTS DGFQGGLLNS AAPWPMQPHQ  180
SAFFSFKCQV DLGPPVGLFT EHVSGTSAYH DRINTKAEGT GADSCSQISS ENNPAQQMTV  240
MSGLSAWKGE KIHDLVRDDD LELTLGCPFV KAPPRFEP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-20677372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-20677372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-20677372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-20677372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pta.6940.0root| shoot| xylem
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009352718.15e-43PREDICTED: BES1/BZR1 homolog protein 4-like
STRINGXP_009352718.12e-42(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50750.18e-31BES1/BZR1 homolog 1