PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta004164
Organism
Pinus taeda
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family bZIP
Protein Properties Length: 249aa    MW: 27398.8 Da    PI: 4.7279
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pta#S24911962PU_unrefUnigeneView CDS
PUT-157a-Pinus_taeda-58382547PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.88.7e-12185240257
                XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                +e+ ++ ++q+N++AAr++Rq+++ +i eLee  +++++e+++++ +l + + ev+
  Pta004164 185 EESAVTLKRQRNTLAARKYRQKRLDRISELEEALAAMTNERDDMRLQLARREAEVD 240
                5677899**************************************98888777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.1E-10177246No hitNo description
SMARTSM003382.1E-4183248IPR004827Basic-leucine zipper domain
CDDcd121931.50E-13188239No hitNo description
SuperFamilySSF579592.25E-9188236No hitNo description
PROSITE profilePS502178.875192249IPR004827Basic-leucine zipper domain
PROSITE patternPS000360192206IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
XNRPLCTYRG GQAPSNLNQW QSQQHQEQSA PDNSSCHGSL ISAPAPDSDF GLLCDVSPFL  60
DLPLLDFDFS SQGVYQGNDT TWNFGQNMGE GLFDQITIPD MNTLDTNTQL DVGDGFLAQE  120
QPLITVNSSP LEQPSTSSTS HPPTTTTTNK SPSSSIPGTS TFSLHPSPSS SSGSSRKRKS  180
SPEDEESAVT LKRQRNTLAA RKYRQKRLDR ISELEEALAA MTNERDDMRL QLARREAEVD  240
PLREMMGKK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174179SRKRKS
2190206LKRQRNTLAARKYRQKR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pta.208830.0shoot
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A365MZN71e-133A0A365MZN7_GIBIN; Uncharacterized protein
STRINGFVEG_07194T01e-91(Fusarium verticillioides)