PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta007232
Organism
Pinus taeda
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family bZIP
Protein Properties Length: 374aa    MW: 42385.6 Da    PI: 7.9629
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-157a-Pinus_taeda-11172PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.93.3e-1180120340
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLea 40 
                + k  rr+++NReAAr+sR+RKka++++Le    k ++Le+
  Pta007232  80 DAKTLRRLAQNREAARKSRLRKKAYVQQLESsriKLAQLEQ 120
                67999************************972224444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.8E-873124No hitNo description
SMARTSM003388.0E-1078144IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.23280124IPR004827Basic-leucine zipper domain
PfamPF001702.7E-881117IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.81E-782124No hitNo description
CDDcd147086.92E-2182134No hitNo description
PROSITE patternPS00036085100IPR004827Basic-leucine zipper domain
PfamPF141441.6E-30174249IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
XDSQSAQQTN INSFKRAPQQ PEFESPTSAK KSEMMQITDM GRNNSPATEK FNELDKDVKH  60
EVNRRVHTSS SEPEGTKTPD AKTLRRLAQN REAARKSRLR KKAYVQQLES SRIKLAQLEQ  120
ELQRARTQGV FMGPNGYLND QSHLTGNAAS NGGLSSAAAF DMEYQRWLEE HHRHMCDLRA  180
ALQEHLPDND LRVFVENCLA HYDDLLHIKI VGAKTDVFYL VSGMWKTPAE RCFMWMGGFR  240
PSEILKILIP QIEPLTEQQY QCIYSLQQSS LQAEEAFSQG MEELQHTISE TIAAGSLSSP  300
SNMANYMGQM AVAMGKLANL EILVSQADSL RHQTLQQLHR ILTTRQSAKC LLSIGEYNSR  360
LRALSSLWSA RPRE
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pta.153640.0root
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Specifically expressed in roots. {ECO:0000269|PubMed:12777042}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020526256.11e-158bZIP transcription factor TGA10 isoform X1
RefseqXP_020526257.11e-159bZIP transcription factor TGA10 isoform X2
RefseqXP_020526258.11e-159bZIP transcription factor TGA10 isoform X3
SwissprotQ52MZ21e-155TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0K0M7410.0A0A0K0M741_PINTB; ZIP2 (Fragment)
STRINGERN116621e-158(Amborella trichopoda)