PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta007335
Organism
Pinus taeda
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family bZIP
Protein Properties Length: 364aa    MW: 40181 Da    PI: 9.7201
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-157a-Pinus_taeda-29796PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.35.4e-16294337548
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                +r++r++kNRe+A rsR+RK+a++ eLe++v +L++eN++Lkk+
  Pta007335 294 RRQKRMIKNRESAARSRARKQAYTNELENEVMQLKEENERLKKQ 337
                79***************************************964 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.5E-15284337No hitNo description
SMARTSM003388.7E-15290353IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.484292337IPR004827Basic-leucine zipper domain
PfamPF001708.4E-13294337IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-11294337No hitNo description
CDDcd147074.48E-27294343No hitNo description
PROSITE patternPS000360297312IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MGSRTMLSSN GGRTPQFQPL VRQNSLYNLT LEEVQNQLGD ASKPLSSMNM DELLKNIWTQ  60
EESQAISMAI GNGPMNGVPP NSAPASGGLQ RQGSLTIPRT LSRKTVDEVW RDIQQSQGKS  120
NEEKKPQQRQ STFGEMTLED FLVKAGVVRE DNNGNSNNNN SSAVTVGIAE SPQPVSVCGV  180
PTAGIGMDAM AAAQNLQQQA EWYQYQLNTA QQQQQQQQQQ QQQQQNMMVA YGNKRPVPPN  240
GPLGIPGNPL LEGGYGDNQL ALSSPLMGCT SSDSQTPGRK RGAPESIIEK TVERRQKRMI  300
KNRESAARSR ARKQAYTNEL ENEVMQLKEE NERLKKQQFL EKLLPSVPPP QPKHTLRRTG  360
SAPF
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pta.162120.0root| shoot
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006836156.21e-118ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_020518547.11e-118ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
TrEMBLA0A0D6QWG11e-176A0A0D6QWG1_ARACU; Uncharacterized protein
STRINGXP_010251669.11e-116(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49720.23e-42abscisic acid responsive element-binding factor 1