PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta008068
Organism
Pinus taeda
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family bZIP
Protein Properties Length: 315aa    MW: 34647.5 Da    PI: 5.2193
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-157a-Pinus_taeda-39582556PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.38.9e-10142176337
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvke 37 
                e+kr+ r++ NReAA  sRqR+k +i+ Le k+k 
  Pta008068 142 ESKRQLRLINNREAAFQSRQRRKSYIQGLESKCKM 176
                68******************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-4140204IPR004827Basic-leucine zipper domain
PfamPF001708.1E-8142176IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.31E-11144202No hitNo description
Gene3DG3DSA:1.20.5.1701.9E-12144203No hitNo description
CDDcd147047.29E-14145195No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MSDDAGSPII KDFEGDLGCD DHDQLKDWLH RDFTDEGFIL EDLIPCGEDD ACDLGASAVH  60
ANAKGFCSDF GDFEDLFVNS SSSASPNNNS DAVDVNCHGP RTTEGTALVN GYSVDNKESQ  120
SSIHGLVPET RAHGVQDHKI VESKRQLRLI NNREAAFQSR QRRKSYIQGL ESKCKMWENY  180
CNQLQGSIAF VCTENTVLRD ELSRCKSQKG SNGVSEPAVL KDSPPLESRS HLTTLVLAGH  240
IIGVHCLEWL LAALTILLLV GAVNPRSVNS TSQAEDEYKS SIFRVSSTFG EKRPVLEAFP  300
VTSSKALSSC RHHYW
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pta.131140.0needle| root| xylem
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56660.12e-09basic region/leucine zipper motif protein 49