PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta008737
Organism
Pinus taeda
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family bZIP
Protein Properties Length: 286aa    MW: 31827.1 Da    PI: 9.8116
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-157a-Pinus_taeda-43906PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.64e-11240846
               HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
               rr+++NReAAr+sR+RKka++++Le+k+ +L++  ++L 
  Pta008737  2 RRLAQNREAARKSRLRKKAYVQQLENKSVKLSQLEQELE 40
               8******************************99887664 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0066170IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.438141IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.75E-7241No hitNo description
PfamPF001703.4E-8240IPR004827Basic-leucine zipper domain
PROSITE patternPS000360217IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.2E-9243No hitNo description
PfamPF141441.9E-3288160IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
XRRLAQNREA ARKSRLRKKA YVQQLENKSV KLSQLEQELE RARQQGIYIG GSSGDHISSA  60
NGAANAGAAA FDLEYAHWVE EQNRTNFHLR AALTAHVTDI ELRILVEGGM AHYDALFRMK  120
SVAAKADVFH LVSGMWKTPA ERCFMWMGGF RPSELLKILK PQLEPLTEQQ VMSVDNLQHS  180
SQQAEDALSQ GMEALQQSLA ETLAAGSLGA SNVANYMGHM AMAMGKLGML ENFVHQADNL  240
RQQTLQQMSR ILTTRQAARG LLAMGDYFSR LRALSSLWAA RPREPA
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pta.100420.0root| shoot| xylem
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024529114.11e-160transcription factor TGA2.3
RefseqXP_024536795.11e-160transcription factor TGA2.3 isoform X1
RefseqXP_024536796.11e-160transcription factor TGA2.3 isoform X2
SwissprotQ6IVC31e-143TGA22_ORYSJ; Transcription factor TGA2.2
TrEMBLA0A3G6J9K50.0A0A3G6J9K5_PINTA; BZIP transcription factor 28
STRINGEFJ228471e-164(Selaginella moellendorffii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-126bZIP family protein
Publications ? help Back to Top
  1. Chern M,Fitzgerald HA,Canlas PE,Navarre DA,Ronald PC
    Overexpression of a rice NPR1 homolog leads to constitutive activation of defense response and hypersensitivity to light.
    Mol. Plant Microbe Interact., 2005. 18(6): p. 511-20
    [PMID:15986920]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]