PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta008860
Organism
Pinus taeda
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family bZIP
Protein Properties Length: 282aa    MW: 31269.7 Da    PI: 4.4524
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-157a-Pinus_taeda-66602PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.61.3e-08219266653
                HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                ++ ++ +N++AArrsR+RK++ + eLe+  +   +  ++ ++++ +l+
  Pta008860 219 VAAKRLQNTLAARRSRRRKLEHQLELETNLERERQLKEQWRSRAMTLE 266
                6789***********************988877777777777766665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579597.8E-8217269No hitNo description
CDDcd121931.04E-19217269No hitNo description
PROSITE patternPS000360222236IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MTPSAEDEPF SSLCSEYLTM LDSTPSNASV EEATQAILDI FNAGDPQTKP SDDFLTSPME  60
ESPFDDFLSN QALGGDFQDF TSPLIFESDD VGAPYHNTPL FDDVGLFEPH SSSDKRAAPH  120
LSSAVDLDRM YTVTPGTPAL DASPFFPPSH RLPCNLPTGT RKNLTPDTLI PLDAPVQPRN  180
YLTPSVTSRK EPSRKRSRTE ASTDADEEAD KDVGELDAVA AKRLQNTLAA RRSRRRKLEH  240
QLELETNLER ERQLKEQWRS RAMTLEALLM SHGIPIPPAI PY
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pta.129271e-161root| xylem
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1X6MK475e-60A0A1X6MK47_9APHY; Uncharacterized protein
TrEMBLA0A1Y2I8Q99e-58A0A1Y2I8Q9_PYCCO; Uncharacterized protein
STRINGS8EQU35e-54(Fomitopsis pinicola)