PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta009787
Organism
Pinus taeda
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family bZIP
Protein Properties Length: 253aa    MW: 28342.4 Da    PI: 5.8747
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pta#S25536225PU_unrefUnigeneView CDS
PUT-157a-Pinus_taeda-5698PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.48.5e-15183228550
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                +r++r++kNRe+A rsR+R++a++ eLe +v +L +eN +L+ke e
  Pta009787 183 RRQKRMIKNRESAARSRARRQAYTNELEIEVNKLIEENARLRKEQE 228
                79****************************************9966 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.2E-14174228No hitNo description
SMARTSM003382.4E-11179243IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.093181226IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.94E-10183229No hitNo description
PfamPF001702.8E-12183228IPR004827Basic-leucine zipper domain
PROSITE patternPS000360186201IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MGSQAVLAPS EFRFLQPLER RVEKLHGDGD AGNSNMEDGL LSSPPCAMQR QVSVAGGGSL  60
DQVWRDIHRP NFQTTQAAAV ENFLAQTGLG QREDEEEEEE EDGLNRGNNG SLTIFAMDSV  120
LAGQNLQQPE WLQFQHQHQQ FGELSAQANS NIDIPVVAAS SGSEHPVWKK RGCESITDHT  180
VERRQKRMIK NRESAARSRA RRQAYTNELE IEVNKLIEEN ARLRKEQEAA NLLHSIQPGQ  240
TKHPLRRTTT APF
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pta.346800.0root
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB8LM161e-156B8LM16_PICSI; Uncharacterized protein