PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta011435
Organism
Pinus taeda
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family bZIP
Protein Properties Length: 195aa    MW: 22230.7 Da    PI: 7.1128
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-157a-Pinus_taeda-21831PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.47.6e-14112170563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                +rerr+ +NRe+ArrsR RK++ +eeL+  v+ + aeN++  +  + l++ +++   e+
  Pta011435 112 RRERRMLSNRESARRSRMRKQKHLEELRAQVAHMRAENRQILSSFDILSQRYSQILEEN 170
                79************************************************999988877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.6E-15108172IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.3110173IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.04E-11112164No hitNo description
PfamPF001704.1E-11112170IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-8112184No hitNo description
CDDcd147021.45E-18113164No hitNo description
PROSITE patternPS000360115130IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MQSEQVLLPL SPMISSGSFH LGVDDTRGSQ DFLGRECYES FLNNNYYMLY PPPTLSNSGN  60
NSSSSPEACK PLPKGCYIRQ DSAGSSSHSA QTACNSASDE AEEQQHTIID ERRERRMLSN  120
RESARRSRMR KQKHLEELRA QVAHMRAENR QILSSFDILS QRYSQILEEN RVLKTQTMEL  180
SQQLHQFQQA LTASQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124131RRSRMRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pta.159760.0root
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017232288.12e-29PREDICTED: basic leucine zipper 43
TrEMBLH9MB625e-91H9MB62_PINRA; Uncharacterized protein (Fragment)
TrEMBLH9WH215e-91H9WH21_PINTA; Uncharacterized protein (Fragment)
STRINGAquca_006_00360.12e-28(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.11e-29basic leucine-zipper 42