PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta012432
Organism
Pinus taeda
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family bZIP
Protein Properties Length: 153aa    MW: 17610.5 Da    PI: 10.255
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-157a-Pinus_taeda-56055PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.43.6e-1461119563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                +++rr+ +NRe+ArrsR RK++ ++eL+  + +L aeN    ++ +  ++++ +++ ++
  Pta012432  61 RKQRRMLSNRESARRSRMRKQQHLDELRAQIVQLRAENNHILSKFNLTSQHYLQVEEQN 119
                79*************************************************99998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-1657121IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.80659122IPR004827Basic-leucine zipper domain
PfamPF001706.6E-1061119IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.09E-1261113No hitNo description
Gene3DG3DSA:1.20.5.1707.8E-1061116No hitNo description
CDDcd147021.37E-1662112No hitNo description
PROSITE patternPS0003606479IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MAPPPSTKLN LPPCTTNSTG SSSSMTYGSC PPSSSHSGSE EEEQQRQGQK KEKKKNVIDE  60
RKQRRMLSNR ESARRSRMRK QQHLDELRAQ IVQLRAENNH ILSKFNLTSQ HYLQVEEQNR  120
ILRSQAIDLY QKLHAVTSML QQQQSLGNFD DLX
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17380RRSRMRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003634372.16e-29PREDICTED: bZIP transcription factor 11
RefseqXP_024392804.17e-29basic leucine zipper 63-like
RefseqXP_024392805.17e-29basic leucine zipper 63-like
RefseqXP_024392806.17e-29basic leucine zipper 63-like
RefseqXP_024392808.17e-29basic leucine zipper 63-like
TrEMBLA0A0C9S8791e-44A0A0C9S879_9SPER; TSA: Wollemia nobilis Ref_Wollemi_Transcript_5460_974 transcribed RNA sequence
TrEMBLA0A0C9SA041e-44A0A0C9SA04_9SPER; TSA: Wollemia nobilis Ref_Wollemi_Transcript_5459_968 transcribed RNA sequence
STRINGVIT_18s0001g13040.t012e-28(Vitis vinifera)
STRINGPP1S158_113V6.13e-28(Physcomitrella patens)