PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_00875.1_g00010.1
Organism
Raphanus sativus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family VOZ
Protein Properties Length: 477aa    MW: 53167.7 Da    PI: 5.179
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_00875.1_g00010.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ439.25.3e-1351984151217
                      VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaata 86 
                              pppsaflgpkcalwdc+rpaqg++w+qdycssfha+la+neg+pg++pv+rp+gi+lkdgllfaalsak+ gk+vgipecegaata
  Rsa1.0_00875.1_g00010.1 198 PPPSAFLGPKCALWDCPRPAQGFDWFQDYCSSFHAALAFNEGPPGMNPVVRPGGIGLKDGLLFAALSAKAGGKDVGIPECEGAATA 283
                              89************************************************************************************ PP

                      VOZ  87 kspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyey 172
                              kspwna+elfdl++le+et+rewlffdkprrafesgnrkqrslpdy+grgwhesrkq+m efgglkrsyymdpqp+++fewhlyey
  Rsa1.0_00875.1_g00010.1 284 KSPWNAPELFDLTVLESETLREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQIMSEFGGLKRSYYMDPQPLHHFEWHLYEY 369
                              ************************************************************************************** PP

                      VOZ 173 eineldalalyrlelkl.vdekksakgkvskdsladlqkklgrlta 217
                              ein++da+alyrlelkl vd+kk++kgkvs+ds+adlqk++grlta
  Rsa1.0_00875.1_g00010.1 370 EINKCDACALYRLELKLvVDGKKNSKGKVSTDSVADLQKQMGRLTA 415
                              ****************7369************************97 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009408Biological Processresponse to heat
GO:0009414Biological Processresponse to water deprivation
GO:0009631Biological Processcold acclimation
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    Send to blast
MTGKRSKITC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRGVDVTL LEEQVNQMLR  60
EWKSELNEPS PASSLQQEQG GGGTLGSFST DICRLLQLCD EEDDATSKLA PPKPEPADQN  120
LEAGKATVFP REKPEHEFPL ADQCKDPSLT VGNNFDLDYN QYDLQQEFEP NFNGGGGFND  180
CPTYGPLHIS AFIPTICPPP SAFLGPKCAL WDCPRPAQGF DWFQDYCSSF HAALAFNEGP  240
PGMNPVVRPG GIGLKDGLLF AALSAKAGGK DVGIPECEGA ATAKSPWNAP ELFDLTVLES  300
ETLREWLFFD KPRRAFESGN RKQRSLPDYN GRGWHESRKQ IMSEFGGLKR SYYMDPQPLH  360
HFEWHLYEYE INKCDACALY RLELKLVVDG KKNSKGKVST DSVADLQKQM GRLTAEFPQE  420
NVNNKRCIKG RPKVNTKVAA ATNTGNVENT VVEQGNEYGV GEEFNYLVGN LTDYYLP
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapRsa1.0_00875.1_g00010.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018438981.10.0PREDICTED: transcription factor VOZ1 isoform X1
RefseqXP_018440222.10.0PREDICTED: transcription factor VOZ1 isoform X1
SwissprotQ9SGQ00.0VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA0A3N6UDZ90.0A0A3N6UDZ9_BRACR; Uncharacterized protein
STRINGBo5g057050.10.0(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM66672745
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.20.0vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]