PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_11894.1_g00001.1
Organism
Raphanus sativus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family C2H2
Protein Properties Length: 87aa    MW: 9633.54 Da    PI: 8.0575
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_11894.1_g00001.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H220.81e-065877120
                             EEETTTTEEESSHHHHHHHH CS
                  zf-C2H2  1 ykCpdCgksFsrksnLkrHi 20
                             y C+ C k F r ++L+rH+
  Rsa1.0_11894.1_g00001.1 58 YICGGCRKIFERYDDLQRHQ 77
                             89*****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    Send to blast
MSSSHNNKKS SSSSTQSSLP DGATTEANNV KPEEKAMTST QQPNSAVDRT FISETDRYIC  60
GGCRKIFERY DDLQRHQGGG CLNRLYL
Cis-element ? help Back to Top
SourceLink
PlantRegMapRsa1.0_11894.1_g00001.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-