PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SMil_00003594-RA_Salv

Organism

Salvia miltiorrhiza

Taxonomic ID

226208

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia

Family

TCP

Protein Properties

Length: 181aa MW: 19546.6 Da PI: 10.006

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SMil_00003594-RA_Salv	genome	NDCTCM	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	24.6	8.2e-08	112	144	41	73
TCP 41 fdkdsktieWLlqqakpaikeltgtssssasec 73 + +d++ ieWL++qa+p+i++ tg ++ +a++ SMil_00003594-RA_Salv 112 HRTDGEIIEWLIRQAEPSIIATTGIDTVPAEAI 144 789*********************988888544 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF14223	1.1E-8	1	63	No hit	No description
Pfam	PF03634	1.3E-4	112	143	IPR005333	Transcription factor, TCP

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence Send to blast
MSEGRSVHEH VMHMTNLFEK LDLVGGSIDG EVKVDIIINS FSKSFENTVI SKKNYTLNKL 60 LNALVTTKGV LGKGAQVLVS ADGPSFSLKG VKKKKGPWGK KGKQNTHSRT RHRTDGEIIE 120 WLIRQAEPSI IATTGIDTVP AEAISTFSGS LLLSPDAATM GLACLLCPLP RRAAGWIYAN 180 C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72010.1	3e-10	TCP family protein