PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00004511-RA_Salv
Common NameWRKY58
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family WRKY
Protein Properties Length: 260aa    MW: 28893.3 Da    PI: 7.4413
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00004511-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY58.91e-18120157137
                            ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEE CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkk 37 
                            ++Dgy+WrKYGqK+ ++++ pr+YY+C+ + +Cpvkkk
  SMil_00004511-RA_Salv 120 VKDGYQWRKYGQKVTRDNPSPRAYYKCSLSpSCPVKKK 157
                            58**************************999******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-17114157IPR003657WRKY domain
PROSITE profilePS5081117.442115156IPR003657WRKY domain
SuperFamilySSF1182905.36E-16117161IPR003657WRKY domain
SMARTSM007741.6E-10120169IPR003657WRKY domain
PfamPF031061.1E-14121157IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MEKTSLQFID LNSKPMHNPS ETSHDELIQE LSRMKWENKK LNEILAVVCR NYHDFTKIDC  60
VEELYASRKR KSDQLQSSGH IFRGCCGGGE CSPPGRPREI KSNTSRVHVR IDPSDTSLVV  120
KDGYQWRKYG QKVTRDNPSP RAYYKCSLSP SCPVKKKSRF TRAAQPHPSG AEIPATTATA  180
AAEAPAAAAN SPYLSDPTIC SRIENEESEI QQVLVEQMAS SLTRNHSFTA ALVAAITGRI  240
LDDGSEENDD SYSISRVISE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16671SRKRKS
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM8231810.0KM823181.1 Salvia miltiorrhiza WRKY protein (WRKY58) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081961.11e-78probable WRKY transcription factor 40
TrEMBLA0A0D5Y9D31e-167A0A0D5Y9D3_SALMI; WRKY protein
STRINGMigut.E01464.1.p5e-66(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45002242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.11e-39WRKY DNA-binding protein 40