PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00004615-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family NAC
Protein Properties Length: 884aa    MW: 99987 Da    PI: 6.6195
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00004615-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM68.91.4e-215786681101
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                            +ppGfrFhP+d el+ +yLkkk+++++l++       d+ ++ePwdLp ++++ +e  wyfFs rd+k+ +++r+n      yWk+ g
  SMil_00004615-RA_Salv 578 MPPGFRFHPSDLELMAYYLKKKITSTPLHI-------DLDNCEPWDLPeTAATFREPAWYFFSLRDRKHLNSTRANS----RYWKTRG 654
                            79***********************99777.......999********445555778***********998777665....4****** PP

                    NAM  88 kdkevlskkgelvg 101
                             +k+v++++++  g
  SMil_00004615-RA_Salv 655 MHKHVMNSSESMQG 668
                            ******97666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM002204.0E-12324595IPR000719Protein kinase domain
PROSITE profilePS5001128.301324595IPR000719Protein kinase domain
PfamPF077143.5E-35327537IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain
SuperFamilySSF561124.59E-51327537IPR011009Protein kinase-like domain
Gene3DG3DSA:3.30.200.209.5E-12330389No hitNo description
Gene3DG3DSA:1.10.510.102.7E-36390546No hitNo description
PROSITE patternPS001080448460IPR008271Serine/threonine-protein kinase, active site
SuperFamilySSF1019412.75E-24566683IPR003441NAC domain
PROSITE profilePS5100516.842578713IPR003441NAC domain
PfamPF023652.7E-12579661IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 884 aa     Download sequence    Send to blast
MLHNHMIIVL LVISIGRLGA AVDPNCISIN RDGGAAPATR KWHRDAAPKG SSTTSTVKGD  60
LITAVDPVPA RISSSQFSFS FQPSPGRDTS EVDVYVDNSA SLERVHYQHI KWGPVSAGDD  120
IASMFGMWAE PTIKENAEMA TNKTWRVSVD VGFKYVVRLH LCEAGLDMDF VLLINNMIFL  180
TSADMLQQRE NRNFLWYNNY VVMVEGLKQE GNRDISISLH SHHEFLDRHG PLEGFEVFKL  240
SNHDGNLASP SLVIPVQDSP SQTLLHSLRA LLYNPYGPMS LLSYTILLHM CTILVIVYLE  300
SNAFGLMSLL PNTKEDNKPS SMAKRLAEIL GICEYGGVDR GFVDYGREIL AIKPLKIDFK  360
QGEHEFRTVI ETLWGLQHVN LLSLIGCCWK QQEMVLVDEY IPTTKMADRL YKPPRKSNDV  420
CLQSWKQRLQ ICIEVSQALE YLHSGPMIVH RDLKASNILL DENFVAKLAD FGLAETRSFR  480
NSQSQDSTDL IGTCGYIAPD FFTTGELTKG SDVYSFGMVL LETLCGRAAM KPRSEEDNRK  540
DNNRSQKENM NLVSPNVKIN ADNYVSRMES TGSQQQEMPP GFRFHPSDLE LMAYYLKKKI  600
TSTPLHIDLD NCEPWDLPET AATFREPAWY FFSLRDRKHL NSTRANSRYW KTRGMHKHVM  660
NSSESMQGFQ EWQISDFGLA KNGPTQVMAT YGYAAPEYIA TEHLGNVSRL KKLVRGMHKH  720
VLNSFESMQG FEEWQISDFG LAKNGPTQVM ATYGYAAPEY IATEHLGNVS RLKKLVTRMR  780
AFDTIRPSGH YYVGDWKHID VRIEEDAMPF CGVYDLGDWT KPHLKHIYPT KSALDIALIF  840
LESEASMQET QERISSSSET MMIRQSFDLC SAVSRGSQPI LFVC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2qkw_B1e-3532953046241Protein kinase
3hgk_A1e-3532953046241Protein kinase
3hgk_B1e-3532953046241Protein kinase
3hgk_C1e-3532953046241Protein kinase
3hgk_D1e-3532953046241Protein kinase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012837258.11e-122PREDICTED: putative receptor-like protein kinase At5g39000 isoform X1
RefseqXP_012837259.11e-124PREDICTED: putative receptor-like protein kinase At5g39000 isoform X2
TrEMBLA0A4D9B3031e-176A0A4D9B303_SALSN; Serine/threonine-protein kinase PBS1
STRINGMigut.B00009.1.p1e-121(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.11e-21NAC domain containing protein 25