PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00005785-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family bZIP
Protein Properties Length: 195aa    MW: 21673.4 Da    PI: 10.888
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00005785-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.91.8e-074481946
                           CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  9 rkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
                           r  +NR AA rsR+RKk+ +  Le k+k  eae k+L 
  SMil_00005785-RA_Salv 44 RQLRNRDAAVRSRERKKMLVRDLEMKSKYYEAECKRLG 81
                           899******************************99885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.9E-84396No hitNo description
PfamPF077163.2E-74389IPR004827Basic-leucine zipper domain
CDDcd147049.01E-124492No hitNo description
PROSITE patternPS0003604458IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.5E-84496No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MYTKNLFPLL GVGGILPLHV GRFCGSSLVC LIVLASVDEI LSSRQLRNRD AAVRSRERKK  60
MLVRDLEMKS KYYEAECKRL GILLQCCLAE NQALRLSLHS GQAFDASRTK QESAVLLLGK  120
DFPTPILSFP APRSLFVQSY LLRKLIPAVG FPAWVPGHHI PVNPAQPAPI SSGSESSAKR  180
QQHRAEKRGS KRSRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022748488.13e-41bZIP transcription factor 60-like isoform X2
TrEMBLA0A2N9ITV34e-45A0A2N9ITV3_FAGSY; Uncharacterized protein
STRINGMigut.N02994.1.p4e-34(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA71012128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.15e-16basic region/leucine zipper motif 60