PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00006209-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family ERF
Protein Properties Length: 126aa    MW: 14126.7 Da    PI: 11.2648
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00006209-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.44.8e-103254229
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrk 29
                           +++GVr+++ +g+W+AeIrdp++    k
  SMil_00006209-RA_Salv 32 KFRGVRRRP-WGKWAAEIRDPCK----K 54
                           89*******.**********854....3 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103211.4163290IPR001471AP2/ERF domain
PfamPF008471.7E-43253IPR001471AP2/ERF domain
SuperFamilySSF541712.16E-63258IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.0E-103256IPR001471AP2/ERF domain
SMARTSM003800.00723275IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    Send to blast
MCIPNCIWMS LHPKPKQVSS KAAALAEGEC QKFRGVRRRP WGKWAAEIRD PCKKEHNVLS  60
GDNSCDDFRN RSSPASVLSF KSSLTGARRA RPVLPKPKMK CVGPFARLRR RNIVSACRII  120
PPTPCL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858195.14e-12PREDICTED: ethylene-responsive transcription factor CRF4-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49423126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.23e-10cytokinin response factor 2