PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SMil_00006418-RA_Salv

Organism

Salvia miltiorrhiza

Taxonomic ID

226208

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia

Family

bZIP

Protein Properties

Length: 253aa MW: 28226 Da PI: 10.2745

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SMil_00006418-RA_Salv	genome	NDCTCM	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	23.9	8.9e-08	200	251	5	48
CHHHCHHHHHHHHHHHHHHHHHHHH........HHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeie........eLeekvkeLeaeNkaLkke 48 +r rrk+kNRe+A rsR+RK+a++e eL +kv Le+eN++Lkke SMil_00006418-RA_Salv 200 RRLRRKIKNRESAARSRARKQARLEfhsqayhnELVTKVSRLEEENSKLKKE 251 688*****************99876555555559999999999999999987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	7.4E-9	195	251	No hit	No description
SMART	SM00338	0.0079	196	253	IPR004827	Basic-leucine zipper domain
CDD	cd14707	7.54E-14	200	250	No hit	No description
PROSITE pattern	PS00036	0	203	218	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence Send to blast
MGIQTMNSHV SGGGQQSHVQ HPLQRCNSWL GLTLDQVERH LLGNLAKPLG SMNLDELLKK 60 VWTTDSSHSS GMESVETSPA ASLQRQASWS LARAFTGKTV NEVWRDIQLG YKMSNVEGLR 120 SQTLGETTLE DFLVKAGMYV SNAPSVSIEP VMSLDSALKS HKFSSQMGLL SPSPSIDELS 180 DTPLPGRKRM SGDLEKTIER RLRRKIKNRE SAARSRARKQ ARLEFHSQAY HNELVTKVSR 240 LEEENSKLKK EKA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011090205.1	1e-130	ABSCISIC ACID-INSENSITIVE 5-like protein 6 isoform X2
TrEMBL	A0A4D8Y1W8	1e-165	A0A4D8Y1W8_SALSN; ABA responsive element binding factor
STRING	Migut.N02398.1.p	1e-96	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12596	16	19

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-32	ABA-responsive element binding protein 3