PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SMil_00006531-RA_Salv

Organism

Salvia miltiorrhiza

Taxonomic ID

226208

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia

Family

bZIP

Protein Properties

Length: 315aa MW: 35334.4 Da PI: 10.8974

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SMil_00006531-RA_Salv	genome	NDCTCM	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	27.2	8.2e-09	139	185	15	61
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 15 eAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 ++Ar sR+RK++ +eeL v+eL +N++ l +++ +++s SMil_00006531-RA_Salv 139 SSARQSRLRKQKHMEELMVQVAELRRQNHQILTSLHATTQHHVAVES 185 59***************************998887777666555555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	0.0091	134	189	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	8.4E-5	140	175	No hit	No description
SuperFamily	SSF57959	2.91E-5	140	180	No hit	No description
Pfam	PF07716	1.3E-4	140	175	IPR004827	Basic-leucine zipper domain
CDD	cd14702	2.52E-11	140	180	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence Send to blast
MNGLSKWLSG FGYPINRTEI PGFGYPITEN FGSLNPVRLL HPLRRPTPST ALRPPPSASA 60 TSPKRDCPKR DQATPASCPG CSDAPPSSGN RQSADCSPIP SSAAWRNHRT IHETDSYHSS 120 LPKNGWCSIN PRILVDASSS ARQSRLRKQK HMEELMVQVA ELRRQNHQIL TSLHATTQHH 180 VAVESENTAS DLGFPQQNPL APRPEPPRRR ILRATHRRPT PSSIARARSA VQWAAHGRAR 240 SAQPLQRLWR GELEFRGAAS QQWRSNAAEC AAPSVSEQQC SGGGGRQLWS DDEKERERER 300 ERREGEERER REREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.2	2e-13	basic leucine-zipper 44