PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00006974-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family G2-like
Protein Properties Length: 130aa    MW: 14231.3 Da    PI: 9.1242
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00006974-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like52.98.3e-1755862556
                G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRla 56
                            +AtPk+i +lmkv+gLt ++vkSHLQkYRl+
  SMil_00006974-RA_Salv 55 SVATPKQITQLMKVEGLTSDEVKSHLQKYRLH 86
                           57****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.33E-65586IPR009057Homeodomain-like
TIGRFAMsTIGR015572.6E-135586IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.602.3E-145686IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    Send to blast
MEASRQELQS QRMKQLSADK AKWMSSATLW NHQVPPPELR LAPPEDSHVC TRENSVATPK  60
QITQLMKVEG LTSDEVKSHL QKYRLHTGIQ APSPVVVVGG IWVPPEYAAH AGASPAAFYG  120
ATAPTILPPR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022999194.14e-23myb family transcription factor EFM-like isoform X1
RefseqXP_022999195.14e-23myb family transcription factor EFM-like isoform X2
TrEMBLA0A0K9PLA51e-20A0A0K9PLA5_ZOSMR; Myb family transcription factor
TrEMBLA0A2G3BNB12e-20A0A2G3BNB1_CAPCH; Uncharacterized protein
STRINGLus100433047e-22(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2035823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.11e-13G2-like family protein