PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SMil_00007531-RA_Salv

Organism

Salvia miltiorrhiza

Taxonomic ID

226208

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia

Family

G2-like

Protein Properties

Length: 437aa MW: 48721.1 Da PI: 7.3423

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SMil_00007531-RA_Salv	genome	NDCTCM	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	38	3.6e-12	125	153	27	55
G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 Pk+il+lm+v+ Lt+e+v+SHLQkYRl SMil_00007531-RA_Salv 125 VGPKKILDLMGVPWLTRENVASHLQKYRL 153 56**************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50110	13.823	1	63	IPR001789	Signal transduction response regulator, receiver domain
SuperFamily	SSF52172	2.28E-7	15	70	IPR011006	CheY-like superfamily
Gene3D	G3DSA:3.40.50.2300	3.7E-11	22	70	No hit	No description
SuperFamily	SSF46689	1.56E-6	123	157	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	1.8E-13	123	158	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.5E-10	125	153	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000160	Biological Process	phosphorelay signal transduction system
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence Send to blast
MTHCISTATF RVYHQETKPY IYAVMSVDGE TSRVMKGVQH GACDYLLKPI RMKELRNIWQ 60 HVFRKRIHEV RDIEGHESLD EMMLRGGADL SDDGFFVRWG SSLWGRRGKT LITRFVSLTA 120 FVAEVGPKKI LDLMGVPWLT RENVASHLQK YRLYLSRLQK ENELRATLGG AKLSDSSPKD 180 AAAGGNAGLQ TPVTKASPCL KHDDPKSCEG NVKSMPIAEA KAAAELSSDA KSEPNIQVQY 240 SWSAGAPPLP FKHEQKPPAA FKHEPKPPLQ FKKEQPLFIA EHHRFDHVPV AVAVQSKPSD 300 TPSPAATSKR SQHSEKATKV ESTAALFCLQ PESHLADSHT TIWNTKSSSQ SLESLYDESW 360 HRNALVGTGS PLMSDYSSQS DLYPPNPYLG PIDPFSFNGQ ELFTDVHSHL YDSLKFNPEF 420 PIDPVEYPVI DQGVYIA

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence Send to blast

MTHCISTATF RVYHQETKPY IYAVMSVDGE TSRVMKGVQH GACDYLLKPI RMKELRNIWQ  60
HVFRKRIHEV RDIEGHESLD EMMLRGGADL SDDGFFVRWG SSLWGRRGKT LITRFVSLTA  120
FVAEVGPKKI LDLMGVPWLT RENVASHLQK YRLYLSRLQK ENELRATLGG AKLSDSSPKD  180
AAAGGNAGLQ TPVTKASPCL KHDDPKSCEG NVKSMPIAEA KAAAELSSDA KSEPNIQVQY  240
SWSAGAPPLP FKHEQKPPAA FKHEPKPPLQ FKKEQPLFIA EHHRFDHVPV AVAVQSKPSD  300
TPSPAATSKR SQHSEKATKV ESTAALFCLQ PESHLADSHT TIWNTKSSSQ SLESLYDESW  360
HRNALVGTGS PLMSDYSSQS DLYPPNPYLG PIDPFSFNGQ ELFTDVHSHL YDSLKFNPEF  420
PIDPVEYPVI DQGVYIA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011071178.1	1e-129	two-component response regulator ORR26
TrEMBL	A0A4D8ZX82	1e-171	A0A4D8ZX82_SALSN; Two-component response regulator ARR-B family

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6788	24	33

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	2e-51	response regulator 11