PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00008717-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family bHLH
Protein Properties Length: 154aa    MW: 17161.2 Da    PI: 4.759
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00008717-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.40.0006215432354
                           HHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH 23 LrellPkaskapskKlsKaeiLekAveYIksL 54
                           L +l       +s+ ++Ka+i+  A +YI +L
  SMil_00008717-RA_Salv 15 LEQLRSA---SHSTSVNKASIVVDASRYIEEL 43
                           3333333...48999**************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.106.7E-52660IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MSSRNKKKAA LYQKLEQLRS ASHSTSVNKA SIVVDASRYI EELKERVETL NQDVATLQNS  60
SRQDSLPAVK VETLEKGFLI NVLSEKNCPG LLVSILEAFE ELGLEVLDAR VSCSDNFRLE  120
AISENEGQSD SIDAQVVKRG VLQAIRNWSD EQHD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022859589.16e-80transcription factor bHLH61-like isoform X2
TrEMBLA0A2G9HE707e-86A0A2G9HE70_9LAMI; Uncharacterized protein
STRINGVIT_08s0058g00960.t013e-72(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2945911
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12860.18e-09bHLH family protein