PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00011082-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family TCP
Protein Properties Length: 184aa    MW: 20472 Da    PI: 10.5369
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00011082-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP371.2e-1139723669
                    TCP 36 qdeLGfdkdsktieWLlqqakpaikeltgtssss 69
                           +d+LG d++sk+i+WL+ +ak+ai++l++t++ +
  SMil_00011082-RA_Salv 39 TDRLGCDRPSKAIDWLMAEAKAAIDALADTPAAA 72
                           8*****************************4443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS513698.907165IPR017887Transcription factor TCP subgroup
PfamPF036347.3E-73968IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MDKMGDVTAS GNGKVVQQAK RGTSASVNVA RAAPERIGTD RLGCDRPSKA IDWLMAEAKA  60
AIDALADTPA AADPPPPPPP WKEEKICPRR LLWNCLMPIL KWLGCREFFP GIMERITPLR  120
RSIIRPRGNP FSPQELMPII ILNFKASDFP IRSCQTFAKT LRCQSSASLL RSWILKNREI  180
PHST