PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SMil_00011094-RA_Salv

Organism

Salvia miltiorrhiza

Taxonomic ID

226208

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia

Family

bZIP

Protein Properties

Length: 331aa MW: 36185.6 Da PI: 6.8007

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SMil_00011094-RA_Salv	genome	NDCTCM	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52.8	8.7e-17	266	314	5	54
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lk +l+ + k SMil_00011094-RA_Salv 266 RRQKRMIKNRESAARSRARKQAYTHELENKVSRLEEENERLK-RLQDILK 314 79*************************************999.5555544 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	7.5E-16	256	308	No hit	No description
SMART	SM00338	1.7E-17	262	325	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.519	264	314	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.3E-14	266	310	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.69E-12	266	316	No hit	No description
CDD	cd14707	7.42E-25	266	310	No hit	No description
PROSITE pattern	PS00036	0	269	284	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence Send to blast
MVAQKMGSHG GGSNNTGLSQ AQPQSQIQSH DPNQLARQGS LYSLTLDEVQ NQLGDLGKPL 60 SSMNLDELLK TLWTAEANNQ TGEGVDGVTN VQLPGQSAPG LSLNQQSNLM LSMDLSKKTV 120 DEVWQDIQQG QKRSSLDRKT TLGEMTLEDF LVKAGVVSES AGGNKVLGSV ADGGADPTGM 180 PHHAQWMNYQ MSSIHPQQQQ QGMLPAFMPS HPVQQPITLG GNSIMDAAYP EMTMCSSPLM 240 GTLSDTQTPG RKRVAPDDIA EKSVERRQKR MIKNRESAAR SRARKQAYTH ELENKVSRLE 300 EENERLKRLQ DILKHISIYT SQCAHQQGSV A

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00409	DAP	Transfer from AT3G56850	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011069985.1	1e-157	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	5e-77	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A4D9BM39	0.0	A0A4D9BM39_SALSN; ABA responsive element binding factor
STRING	Solyc10g081350.1.1	1e-120	(Solanum lycopersicum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3334	24	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	3e-66	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]