PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SMil_00011337-RA_Salv

Organism

Salvia miltiorrhiza

Taxonomic ID

226208

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia

Family

bZIP

Protein Properties

Length: 102aa MW: 11803.5 Da PI: 11.5893

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SMil_00011337-RA_Salv	genome	NDCTCM	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	23.8	1e-07	11	44	17	50
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 Arr R+RK++ +eeL v+eL +N++ l SMil_00011337-RA_Salv 11 ARRRRLRKQKHMEELMPQVAELRRQNHQILTSLR 44 9*************************98765554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF57959	4.34E-5	11	52	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.8E-4	11	47	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 102 aa Download sequence Send to blast
MFFISLRSSP ARRRRLRKQK HMEELMPQVA ELRRQNHQIL TSLRATRQHH VAVESGNAAS 60 DLGFPQQNPL APPLEPPEPH QPPHHPPPSD PILYCPRQIF RS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	11	17	RRRRLRK
2	11	18	RRRRLRKQ
3	12	17	RRRLRK
4	13	19	RRLRKQK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A4D8YFE7	4e-19	A0A4D8YFE7_SALSN; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.2	7e-08	basic leucine-zipper 44