PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SMil_00012145-RA_Salv

Organism

Salvia miltiorrhiza

Taxonomic ID

226208

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia

Family

G2-like

Protein Properties

Length: 89aa MW: 9835.3 Da PI: 10.4055

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SMil_00012145-RA_Salv	genome	NDCTCM	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	92.6	3.3e-29	34	83	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 prlrWt++LH++F++av++LGG ++AtPk +lelm+vkgLt++h+kSHLQ SMil_00012145-RA_Salv 34 PRLRWTNDLHKSFINAVDRLGGGDRATPKMVLELMNVKGLTITHIKSHLQ 83 9************************************************* PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	9.558	30	89	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	6.1E-27	30	83	IPR009057	Homeodomain-like
SuperFamily	SSF46689	6.99E-15	31	83	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	8.9E-24	34	84	IPR006447	Myb domain, plants
Pfam	PF00249	1.5E-7	35	83	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 89 aa Download sequence Send to blast
MDSPPALDDT KPDGTPPPTT SKSGVRAYIR SKTPRLRWTN DLHKSFINAV DRLGGGDRAT 60 PKMVLELMNV KGLTITHIKS HLQVEDKTL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	1e-18	34	83	2	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-18	34	83	2	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-18	34	83	2	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-18	34	83	2	51	Protein PHOSPHATE STARVATION RESPONSE 1
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Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011086192.1	3e-33	uncharacterized protein LOC105167992
Swissprot	Q700D9	2e-23	MYBF_ARATH; Putative Myb family transcription factor At1g14600
TrEMBL	A0A2G9GWP7	2e-37	A0A2G9GWP7_9LAMI; Uncharacterized protein
TrEMBL	A0A4D8XSV0	4e-36	A0A4D8XSV0_SALSN; Uncharacterized protein
STRING	Migut.H01576.1.p	1e-32	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7450	20	29

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42660.1	1e-27	G2-like family protein