PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SMil_00014068-RA_Salv

Organism

Salvia miltiorrhiza

Taxonomic ID

226208

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia

Family

bZIP

Protein Properties

Length: 141aa MW: 16509.7 Da PI: 8.5065

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SMil_00014068-RA_Salv	genome	NDCTCM	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.5	5.8e-13	54	107	4	57
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r rr+++NRe+ArrsR RKk+ +e L+ ++ L+ eN++ + l++l+ ++ SMil_00014068-RA_Salv 54 ERRRRRMISNRESARRSRWRKKKHQEDLTSEANRLKLENREIENCLSTLTHQCH 107 5899**********************************************9997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.9E-11	50	107	No hit	No description
SMART	SM00338	2.3E-11	51	115	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.496	53	105	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.5E-11	54	107	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.31E-11	55	108	No hit	No description
PROSITE pattern	PS00036	0	58	73	IPR004827	Basic-leucine zipper domain
CDD	cd14702	2.34E-12	60	107	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence Send to blast
MMAVQNPVHY QLPVLEETIS PSEIDELLSL LECKPTNHST SSSETNRSVY STEERRRRRM 60 ISNRESARRS RWRKKKHQED LTSEANRLKL ENREIENCLS TLTHQCHLVQ RDSNRLLSES 120 IYLQHRLAGL NEILAATMPL Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	56	75	RRRMISNRESARRSRWRKKK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028065855.1	4e-43	basic leucine zipper 4-like
TrEMBL	A0A2G9HUA3	2e-66	A0A2G9HUA3_9LAMI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2820	22	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22850.2	4e-10	basic leucine-zipper 6