PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00017716-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family bZIP
Protein Properties Length: 196aa    MW: 22593.3 Da    PI: 10.3066
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00017716-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.11.2e-10108159458
                            XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                            +++ rr+++NRe+ArrsR RK++ +e+L++ +  L+  N   ++++++l+ +v++
  SMil_00017716-RA_Salv 108 DRKRRRMMSNRESARRSRMRKQKHLENLRNQASRLKLGN---REQANRLRLLVCQ 159
                            7899***********************************...7999999988876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.6E-8105169IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.427107156IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.4E-7109188No hitNo description
SuperFamilySSF579592.34E-7109156No hitNo description
CDDcd147026.21E-15110161No hitNo description
PROSITE patternPS000360112127IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MLSTFPACLS ADAFLGNPFE PGFPPWENHE PPFLFHPHEE PVVFTPQLSH EPVSSNSGSR  60
AQNPALSSGS DDSKRNEPKT LSSGSDDQSR DNFKNKRSGC DETSCVDDRK RRRMMSNRES  120
ARRSRMRKQK HLENLRNQAS RLKLGNREQA NRLRLLVCQT QMFLGENERL RNEAAVLRQR  180
LWEIRQVLVV RQCSNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1108112RKRRR
2108129RKRRRMMSNRESARRSRMRKQK
3121128RRSRMRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012856534.14e-71PREDICTED: basic leucine zipper 43
TrEMBLA0A4D8Y0774e-94A0A4D8Y077_SALSN; Uncharacterized protein
STRINGMigut.H00326.1.p1e-70(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28202251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.24e-30basic leucine-zipper 6