PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00019476-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family G2-like
Protein Properties Length: 215aa    MW: 24113.9 Da    PI: 9.5149
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00019476-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like80.81.5e-25119171156
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                            k+r++W+p LH+rF++a++ LG   +AtPk+i +lmkv+gLt ++vkSHLQkYRl+
  SMil_00019476-RA_Salv 119 KARRCWSPHLHSRFLNALHMLG---VATPKQITQLMKVEGLTSDEVKSHLQKYRLH 171
                            68*******************4...89***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.988116174IPR017930Myb domain
SuperFamilySSF466891.48E-14117171IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.0E-23117171IPR009057Homeodomain-like
TIGRFAMsTIGR015571.7E-22119171IPR006447Myb domain, plants
PfamPF002496.5E-7121169IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MASTELSLDC KPNIESLVLK KTQKLEEFVA RLEEEKLKID AFKRELPLCM QLLSNAMEAS  60
RQELQSQRMK QLSADKAKWM SSATLWNHQV PPPELRLAPP EDSHVCTREN SGDHKEKRKA  120
RRCWSPHLHS RFLNALHMLG VATPKQITQL MKVEGLTSDE VKSHLQKYRL HTGIQAPSPV  180
VVVGGIWVPP EYAAHAGASP AAFYGATAPT ILPPR
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a flowering repressor, directly repressing FT expression in a dosage-dependent manner in the leaf vasculature. {ECO:0000269|PubMed:25132385}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by SVP. Down-regulated by high temperature and gibberellic acid treatment. Not regulated by photoperiod, circadian rhythm under long days or vernalization. {ECO:0000269|PubMed:25132385}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096177.14e-58myb family transcription factor EFM
SwissprotQ9ZQ852e-33EFM_ARATH; Myb family transcription factor EFM
TrEMBLA0A4D8XRP12e-59A0A4D8XRP1_SALSN; Uncharacterized protein
STRINGGSMUA_Achr6P05330_0011e-51(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2035823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13300.16e-31G2-like family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]