PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00021545-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family NAC
Protein Properties Length: 332aa    MW: 37485.5 Da    PI: 4.4181
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00021545-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.81.4e-123911734128
                    NAM  34 ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdW 121
                            +++   + + P +Lp      e  wy  +++         +++  ++g+Wka+g+  ev+s ++   g ++tL +++g  p+g+ t+W
  SMil_00021545-RA_Salv  39 LEDSSPFLYPPYNLP------EGMWYLAHSN---------EEKESAHGFWKAKGEACEVYS-NNVINGWRTTLEYFEGLPPDGKLTNW 110
                            555555555555555......1234443333.........3344568**************.9999********************** PP

                    NAM 122 vmheyrl 128
                            +m+ey +
  SMil_00021545-RA_Salv 111 LMQEYMI 117
                            *****76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.6418140IPR003441NAC domain
SuperFamilySSF1019412.88E-2112138IPR003441NAC domain
PfamPF023651.0E-614116IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MCPPAQPPPC EIGFYWSDEQ IISLLADYSP GSYLPDNVLE DSSPFLYPPY NLPEGMWYLA  60
HSNEEKESAH GFWKAKGEAC EVYSNNVING WRTTLEYFEG LPPDGKLTNW LMQEYMITPK  120
ELSDKCRPKA TRLLCRVFLC SDQISRSKMN PQNCKNVIES KNINPVKSIN SDTNITTHQD  180
TERESQAKRE CEVVSDTKPN SPPQDLSELE CFSRGDFLEL NDLEDPESHS SSSQNSSCPS  240
KLSEEYFGST DFLRDLEEEV EKSYRQEQFS SSGYRFSMQS DVVLQAAVSG SSVLCDSVKG  300
AETPSTSAGS STREEKKAGF NKFRTYFCFA TF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074497.11e-111NAC transcription factor 29-like isoform X3
TrEMBLA0A4D8Z2Z31e-160A0A4D8Z2Z3_SALSN; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112072123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.11e-11NAC domain containing protein 41