PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00021671-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family ERF
Protein Properties Length: 238aa    MW: 26164.2 Da    PI: 8.2018
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00021671-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.41.2e-1084119847
                    AP2   8 wdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaai 47 
                             +k +g++ AeIrd      +rkr++lg+f taeeA +a+ 
  SMil_00021671-RA_Salv  84 KRK-SGKYSAEIRD----RrVRKRIWLGTFRTAEEASAAYL 119
                            455.8*********....3356*****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003805.0E-578142IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-1378125IPR001471AP2/ERF domain
CDDcd000183.28E-1378118No hitNo description
PROSITE profilePS5103212.19478118IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-1079123IPR016177DNA-binding domain
PfamPF008477.8E-583120IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MEEFSASPRK IRLSYSDPDA TDSSSDESEP PEKKSKRITH EFVLPQGRNL RLECDTKASG  60
KERGGGGDEF RNLITKRNFV GTHKRKSGKY SAEIRDRRVR KRIWLGTFRT AEEASAAYLS  120
RKREIEEDLR ARKGIVWVSS KETREREIEE GLKAREGIVW VASKKTGGSD SPSSVLEITA  180
ADSSDESGGG GAAVPPERKI GFLCGVQIVD PNGFLVGDFS KLDDLSISTA DDGVVLLG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A4D9C9D27e-92A0A4D9C9D2_SALSN; EREBP-like factor
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA50751534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.16e-11erf domain protein 9