PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00022478-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family EIL
Protein Properties Length: 444aa    MW: 50413.1 Da    PI: 4.9074
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00022478-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3369.74.9e-113283402353
                            XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                   EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasd 89 
                            +l++rmwkd+m+++++    k +le+++++t      +  e++rrkkm raQD+iLkYM+k+m vc+ qGfvYgi+p+kgkpv+gasd
  SMil_00022478-RA_Salv  28 DLNRRMWKDRMRMQKM----KAKLEAEQPDTA-----EKLEHSRRKKMCRAQDAILKYMVKIMDVCKGQGFVYGIVPDKGKPVTGASD 106
                            89************33....334555677443.....458************************************************ PP

                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S- CS
                   EIN3  90 sLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGk 177
                            sLr+WWke+v+fd n+paai++       ++   ++   + s  h l+el DTtlgSLLsalmqhc ppqrrfple+g++pPWWP G+
  SMil_00022478-RA_Salv 107 SLRRWWKEDVRFDVNAPAAIADFL-----PQMTAEM--GPDSFMHLLQELHDTTLGSLLSALMQHCVPPQRRFPLERGLAPPWWPRGD 187
                            *********************983.....3333333..578899******************************************** PP

                            -HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXX CS
                   EIN3 178 elwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahs 264
                            elwwg +g +++++g+ppy+kphdlkkawkvsvL+a ikhm+p++e++r+l+ qsk+lq+km+a +s+++++v+nqee++++      
  SMil_00022478-RA_Salv 188 ELWWGDQGdAAHEHGPPPYRKPHDLKKAWKVSVLAAIIKHMAPDLERMRRLVSQSKSLQHKMTANDSATWAKVVNQEEAIVK------ 269
                            ********9999******************************************************************9772...... PP

                            XXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXX CS
                   EIN3 265 sslrkqspkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqn 352
                                  ++++++s+  +ed +g++++             + ++r  +k+p e  +   +   + cq+s ++++  e++fadkns+ ++
  SMil_00022478-RA_Salv 270 ----LAQKSLKISDL-DEDEQGESDED------------LGLIRANEKRPCEFGSGRFH-LAYACQNSGCPRNADEAGFADKNSRIDH 339
                            ....35678899988.55666666555............34444444455555555544.579**********************998 PP

                            X CS
                   EIN3 353 e 353
                            +
  SMil_00022478-RA_Salv 340 Q 340
                            7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.9E-11128265No hitNo description
Gene3DG3DSA:1.10.3180.108.2E-65141272IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167689.42E-57143268IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    Send to blast
MVEIYDCEGE PSSPALELSE DESISFADLN RRMWKDRMRM QKMKAKLEAE QPDTAEKLEH  60
SRRKKMCRAQ DAILKYMVKI MDVCKGQGFV YGIVPDKGKP VTGASDSLRR WWKEDVRFDV  120
NAPAAIADFL PQMTAEMGPD SFMHLLQELH DTTLGSLLSA LMQHCVPPQR RFPLERGLAP  180
PWWPRGDELW WGDQGDAAHE HGPPPYRKPH DLKKAWKVSV LAAIIKHMAP DLERMRRLVS  240
QSKSLQHKMT ANDSATWAKV VNQEEAIVKL AQKSLKISDL DEDEQGESDE DLGLIRANEK  300
RPCEFGSGRF HLAYACQNSG CPRNADEAGF ADKNSRIDHQ LICAYGNTEN GLQLFLNDQQ  360
KETQILQELN LCEKLMMPLE KSNEETSCSI ATSGSFWNLD EMEQLGFGAV YGNLDPNNVK  420
PMEEVFNEDF APSIWDLGYH DVVD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A7e-551412691128Protein ETHYLENE INSENSITIVE 3
4zds_B7e-551412691128Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011090514.11e-169LOW QUALITY PROTEIN: putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-133EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A4D8YR070.0A0A4D8YR07_SALSN; Ethylene-insensitive protein 3
STRINGMigut.H02377.1.p1e-151(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30423178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-135EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]