PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00024342-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family G2-like
Protein Properties Length: 183aa    MW: 21110.2 Da    PI: 8.0024
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00024342-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like68.61e-21130175551
                G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                            +Wt+eLHe+F++aveqL G+ +  Pk+ilelm+v+gLt+ +v+SHLQ
  SMil_00024342-RA_Salv 130 EWTQELHEKFMDAVEQL-GEGRCFPKEILELMNVPGLTRMQVASHLQ 175
                            7****************.9**************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23002.1E-4152No hitNo description
PROSITE profilePS5011010.765139IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5129411.515121182IPR017930Myb domain
SuperFamilySSF466893.46E-16125179IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.6E-21126175IPR009057Homeodomain-like
TIGRFAMsTIGR015579.5E-20129179IPR006447Myb domain, plants
PfamPF002491.3E-8130175IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MSVDDDTITA MRVIEIGAFL YIKRPTTLEM LRCLWQHVAR ENARAMRERE RLMAANHVTP  60
PRGIEFREMT HHLEENPSSV GPNNLFAIAT KEKGKFKKGY YQNGRRGEEE YNSDNNVSAH  120
GKVKRKVCTE WTQELHEKFM DAVEQLGEGR CFPKEILELM NVPGLTRMQV ASHLQVCFST  180
TNI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072587.12e-63two-component response regulator ARR14-like
TrEMBLA0A4D8ZBA43e-63A0A4D8ZBA4_SALSN; Two-component response regulator ARR-B family
TrEMBLA0A4D9B0S74e-64A0A4D9B0S7_SALSN; Two-component response regulator ARR-B family
STRINGMigut.D00936.1.p5e-46(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.12e-20response regulator 2