PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00025719-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family WRKY
Protein Properties Length: 148aa    MW: 17090.3 Da    PI: 8.9622
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00025719-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY35.32.3e-11112133122
                            ---SS-EEEEEEE--TT-SS-E CS
                   WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                            +dDgy+WrKYG+K+vk+s++pr
  SMil_00025719-RA_Salv 112 MDDGYKWRKYGKKMVKNSPNPR 133
                            69*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.5E-11100133IPR003657WRKY domain
SuperFamilySSF1182902.22E-9105134IPR003657WRKY domain
PROSITE profilePS5081112.53107133IPR003657WRKY domain
SMARTSM007745.8E-4112144IPR003657WRKY domain
PfamPF031065.2E-7113135IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
MLKLKSTINT TPQSHQNPNS PSLNCDHDLS LFGNQLNDPL YFNIANYLMF DEDFGSNDNN  60
ISCEKSVVDC PNGSFTSVPF ANNIKPRRVV NKYKAQDDCR FAFRTKTQLE VMDDGYKWRK  120
YGKKMVKNSP NPRPAHLFIN YCKIDRNL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020554654.12e-24probable WRKY transcription factor 51
TrEMBLA0A4D8YZR22e-71A0A4D8YZR2_SALSN; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21242462
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.15e-15WRKY DNA-binding protein 50