PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00027717-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family ERF
Protein Properties Length: 202aa    MW: 22270.8 Da    PI: 9.7828
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00027717-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.76.1e-1877128155
                    AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            sgy+GV  d ++grW AeIrd       r r++lg+f+taeeAa+a +aa+++++g
  SMil_00027717-RA_Salv  77 SGYRGVGEDGRWGRWSAEIRDrI----GRCRHWLGTFDTAEEAARALDAAARRMKG 128
                            89****99*************32....25*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575126No hitNo description
SuperFamilySSF541713.86E-1777137IPR016177DNA-binding domain
PfamPF008477.1E-1277128IPR001471AP2/ERF domain
PROSITE profilePS5103219.20378136IPR001471AP2/ERF domain
SMARTSM003801.6E-2078145IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-2379136IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MNKNSNFDLS ENGHELLHFH PSSSSCNRSP NRVEIDYAEI DRRSPPVLEG IAAVVGERVL  60
FGDKVERESG SNRRKTSGYR GVGEDGRWGR WSAEIRDRIG RCRHWLGTFD TAEEAARALD  120
AAARRMKGSG ARTNFQIPPI LPSPSSSCSD QPRRRIRAKT RGKCSVVTCA AHLFSPNFAA  180
DATNDVGLEL QDGGFGNKNR VS
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017978247.12e-39PREDICTED: ethylene-responsive transcription factor ERF084
SwissprotQ9M8M55e-26ERF84_ARATH; Ethylene-responsive transcription factor ERF084
TrEMBLA0A4D9AD224e-66A0A4D9AD22_SALSN; EREBP-like factor
STRINGEOY259768e-39(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA115522225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.11e-22ERF family protein