PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SMil_00028257-RA_Salv

Organism

Salvia miltiorrhiza

Taxonomic ID

226208

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia

Family

Nin-like

Protein Properties

Length: 246aa MW: 28291 Da PI: 4.7524

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SMil_00028257-RA_Salv	genome	NDCTCM	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	82.4	4.4e-26	82	131	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i e++skyF +pi++AA+eL+v+lT LKr+CR++GI+RWPhRk+ksl SMil_00028257-RA_Salv 82 EDICREMISKYFIMPIAEAARELNVGLTFLKRKCRELGIRRWPHRKLKSL 131 67899*******************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.712	65	151	IPR003035	RWP-RK domain
Pfam	PF02042	2.7E-21	84	131	IPR003035	RWP-RK domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0051302	Biological Process	regulation of cell division

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence Send to blast
METHFVDQDV FSFQTELPLV DHLSACCGYG AWDLEYDVSY ADVFLSDPSF TSLDYNILLI 60 PDGLNEQMLE PMGEKGSKHK NEDICREMIS KYFIMPIAEA ARELNVGLTF LKRKCRELGI 120 RRWPHRKLKS LQALIDNLKE MGEENTVETR EYLEQEKMLI LEAPNTQMGT RTKRLRQTCF 180 KTNYKKRRLM GNGNTNSNCP QLTSFTINLE QSIQDLSHFN DDGDDEIMAF YSDFASSSDS 240 IGHGIV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G9H3R8	6e-42	A0A2G9H3R8_9LAMI; Uncharacterized protein
STRING	Migut.D01815.1.p	1e-40	(Erythranthe guttata)
STRING	XP_004301148.1	7e-40	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4274	21	42

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66990.1	2e-37	RWP-RK domain-containing protein