PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SMil_00028974-RA_Salv

Organism

Salvia miltiorrhiza

Taxonomic ID

226208

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia

Family

bZIP

Protein Properties

Length: 200aa MW: 23239.6 Da PI: 10.3508

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SMil_00028974-RA_Salv	genome	NDCTCM	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.1	1.2e-10	58	116	4	62
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 +k+ rr +NR++A+rsR +K ++i e++v eLe + L ++e+ k++ l+ + SMil_00028974-RA_Salv 58 RKKLRRTVSNRLSAQRSRVKKAQYIHDMERRVTELEDTITVLTLRVERFKEKRRLLQLQ 116 799*********************************************99998766655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.0E-8	51	114	No hit	No description
SMART	SM00338	2.3E-7	54	119	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.829	57	120	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.5E-8	58	117	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.1E-9	59	109	No hit	No description
CDD	cd14703	9.72E-10	60	111	No hit	No description
PROSITE pattern	PS00036	0	62	77	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence Send to blast
MQVQSKVEAQ AKANESSNNK ATSIFDAPAE TRKATLNLDK AIEYELKHGR KLDPRMDRKK 60 LRRTVSNRLS AQRSRVKKAQ YIHDMERRVT ELEDTITVLT LRVERFKEKR RLLQLQNEAL 120 ERLVQIRLNE ANLAQMVLEK NKAELGRLKE VEKGLVKELH IQAAAAWNCG QQSSSGFYQD 180 EQLLQKQPQL QMDPFLNFEP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011080726.1	2e-44	uncharacterized protein LOC105163901
TrEMBL	A0A4D9AQG1	1e-69	A0A4D9AQG1_SALSN; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7615	19	29

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	2e-13	bZIP family protein