PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0005s0810.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family MYB
Protein Properties Length: 221aa    MW: 23875.3 Da    PI: 8.849
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0005s0810.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.32e-19752147
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
         Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                            +g+W++eEd ll+++v ++G+++W+ Iar ++ gR++k+c++rw + 
  SapurV1A.0005s0810.1.p  7 KGPWSPEEDALLKHLVIKHGPRNWTMIARAVP-GRSGKSCRLRWCNQ 52
                            79******************************.***********985 PP
2Myb_DNA-binding25.14e-0861832346
                            -HHHHHHHHTTTS-HHHHHHHHHH CS
         Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46
                             W++Iar +  gRt++ +k++w++
  SapurV1A.0005s0810.1.p 61 EWAAIARLLD-GRTDNAIKNHWNS 83
                            5*********.***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129427.201157IPR017930Myb domain
SMARTSM007178.0E-17655IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.6E-21655IPR009057Homeodomain-like
PfamPF002494.8E-18752IPR001005SANT/Myb domain
SuperFamilySSF466893.14E-26786IPR009057Homeodomain-like
CDDcd001672.93E-16951No hitNo description
Gene3DG3DSA:1.10.10.602.3E-96088IPR009057Homeodomain-like
PfamPF002491.8E-56183IPR001005SANT/Myb domain
PROSITE profilePS500905.7966285IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MNCYQVKGPW SPEEDALLKH LVIKHGPRNW TMIARAVPGR SGKSCRLRWC NQLSPVVEHR  60
EWAAIARLLD GRTDNAIKNH WNSRLKRKYA DLIVNGGMVS EDGVRDKSAK SVLSSSVLET  120
AYTPSGSEVS DAGLLGTSLL LVQENVPVVE SVISNNADVS TELSLSVAGM KSGQLGRDWV  180
GNKGLLAGDA EKTTTLSPEL LAVIQEMIRK EVRNVMAGSG *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A1e-246886107B-MYB
1gv2_A1e-246883104MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0005s0810.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002298748.11e-129transcription factor MYB44
SwissprotO231601e-48MYB73_ARATH; Transcription factor MYB73
TrEMBLB9GHS71e-128B9GHS7_POPTR; Uncharacterized protein
STRINGPOPTR_0001s30750.11e-128(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF84334124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.11e-48myb domain protein 73
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]