PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0007s0010.2.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bHLH
Protein Properties Length: 222aa    MW: 24723.6 Da    PI: 6.4362
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0007s0010.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.76.4e-11135182455
                             HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                     HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                             +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  SapurV1A.0007s0010.2.p 135 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 182
                             8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.02E-18129199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.49E-10129186No hitNo description
Gene3DG3DSA:4.10.280.103.1E-18131200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.828131181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-8135182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10137187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MDPPAMMNEG GPCSLEEIWQ FPINGGGRGH FDLLNLEQRA AASVRKRRDV DLDVEDDSSS  60
KPTTLSPNNG HTNANGLLRF KTSGSKDEDH HGHHDSKDEA EPSSGRHVEH KTQPTEPSKQ  120
DYIHVRARRG QATDSHSLAE RARREKISER MKILQDLVPG CNKVIGKALV LDEIINYIQS  180
LQHQVEFLSM KLEAVNTRVN PEIEVFASKD VGPNTFSWLC V*
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the control of petal size, by interfering with postmitotic cell expansion to limit final petal cell size. {ECO:0000269|PubMed:16902407}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0007s0010.2.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Isoform 1 is up-regulated by PI/AP3, SEP2, SEP3 and AP1, but repressed by AG. {ECO:0000269|PubMed:16902407}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024465343.11e-123transcription factor BHLH089 isoform X4
SwissprotQ0JXE77e-66BPE_ARATH; Transcription factor BPE
TrEMBLA0A3N7FPN11e-123A0A3N7FPN1_POPTR; Uncharacterized protein
TrEMBLU5FXZ61e-123U5FXZ6_POPTR; Uncharacterized protein
STRINGPOPTR_0010s04920.11e-124(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.13e-61BIG PETAL P
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]